FYI, as far as I know, the Harvard Personal Genome Project is one of the only publicly available resources that has whole genome (and other) data along with health record information available for free use (CC0 licensed) [1]. Open Humans [2] and OpenSNP [3] have data along with various degrees of health record and phenotype information as well.
[1] http://www.personalgenomes.org/
[2] https://www.openhumans.org/
[3] https://opensnp.org/